PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010089407.1
Common NameDREB4H
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 212aa    MW: 22477.8 Da    PI: 4.664
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010089407.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.71.2e-173482355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    y+GVr+++ +g+Wv+eIr+p+    +  r++lg+f t+e+Aa a++ a+++l+g
  XP_010089407.1 34 YRGVRRRS-SGKWVSEIREPR----KpNRIWLGTFPTPEMAAVAYDVAALALKG 82
                    9****888.8*********94....478***********************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.103.4E-303392IPR001471AP2/ERF domain
PfamPF008471.3E-103382IPR001471AP2/ERF domain
PROSITE profilePS5103222.9193390IPR001471AP2/ERF domain
SMARTSM003805.7E-353396IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-203492IPR016177DNA-binding domain
PRINTSPR003676.8E-113445IPR001471AP2/ERF domain
CDDcd000181.79E-244392No hitNo description
PRINTSPR003676.8E-117292IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    Send to blast
MHYSSPNPSS STSGIRVSGN AGNSSSDGEA RRSYRGVRRR SSGKWVSEIR EPRKPNRIWL  60
GTFPTPEMAA VAYDVAALAL KGQDAELNFP NSAGSLPVPA STSPRDIQAA AASAAGAIGA  120
AAAAMGARGA KEASPVNFGG NYSQHEGENI VLETEMNVAN EYVDEDLIFD MPNVLVNMAE  180
GMLLSPPRLD IAGDDADYHV ENAADENLWK FH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A4e-143290463ATERF1
3gcc_A4e-143290463ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF6783760.0KF678376.1 Morus notabilis dehydration responsive element binding transcription factor (DREB4H) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010089407.11e-154Ethylene-responsive transcription factor
SwissprotQ9SJR09e-53ERF24_ARATH; Ethylene-responsive transcription factor ERF024
TrEMBLW6FFV11e-154W6FFV1_9R
STRINGPOPTR_0016s02010.15e-74(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.13e-37ERF family protein